BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E02LP1|AL427322
(691 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1535 1296 0.0
>3x_Contig1535
Length = 11102
Score = 1296 bits (653), Expect = 0.0
Identities = 683/693 (98%), Gaps = 2/693 (0%)
Strand = Plus / Plus
Query: 1 tgggactgagagaactgggttacaggggtcttttatgttctttggaaactgtatgaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgggactgagagaactgggttacaggggtcttttatgttctttggaaactgtatgaccat 753
Query: 61 cagagctatagaaacgcactcgagagagtgtnntn-gtttggtttcccgacatatcttat 119
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 754 cagagctatagaaacgcactcgagagagtgcgtttcgtttggtttcccgacatatcttat 813
Query: 120 atacataccactgacgcgcgacagaaaatagtcaattgagtcacgtggtcattatcattc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 atacataccactgacgcgcgacagaaaatagtcaattgagtcacgtggtcattatcattc 873
Query: 180 cttggcaccacgtgataggcgattagtttgccagtccaattacyaatgaatttacaaatg 239
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 874 cttggcaccacgtgataggcgattagtttgccagtccaattactaatgaatttacaaatg 933
Query: 240 taaacagaggatgagtcagggggcgggaggaggcgaag-agtcacggtcattgtgaccgt 298
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 934 taaacagaggatgagtcagggggcgggaggaggcgaagcagtcacggtcattgtgaccgt 993
Query: 299 cactgctcgaggtcacgatgactgactgacagactgactgactcaagtcagtcagtntgt 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 994 cactgctcgaggtcacgatgactgactgacagactgactgactcaagtcagtcagtctgt 1053
Query: 359 nagtnagatccagtcacaaaacagttacccggagaaagattgtgtgactccatgccacag 418
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 cagtcagatccagtcacaaaacagttacccggagaaagattgtgtgactccatgccacag 1113
Query: 419 ttttcttcccacgtgacctttaaaccggataacccaccaaacgaaaattgcccatgccaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 ttttcttcccacgtgacctttaaaccggataacccaccaaacgaaaattgcccatgccaa 1173
Query: 479 gcaacaaacaccgcaaaaactaaaacacctcgtttgctcagggtgcacaacgttaacgga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 gcaacaaacaccgcaaaaactaaaacacctcgtttgctcagggtgcacaacgttaacgga 1233
Query: 539 cccaggtttgcttgcagtttagaggttaaccgttgaaaccttcccaagaaaaaattttct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 cccaggtttgcttgcagtttagaggttaaccgttgaaaccttcccaagaaaaaattttct 1293
Query: 599 ccgtcccccgctagcacacctgaaacatgctccgcctgggggggacggaccatcggttca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 ccgtcccccgctagcacacctgaaacatgctccgcctgggggggacggaccatcggttca 1353
Query: 659 ctctgtaacactctgtgttacataataaactac 691
|||||||||||||||||||||||||||||||||
Sbjct: 1354 ctctgtaacactctgtgttacataataaactac 1386
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3372
Number of Sequences: 1807
Number of extensions: 3372
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 691
length of database: 10,358,551
effective HSP length: 16
effective length of query: 675
effective length of database: 10,329,639
effective search space: 6972506325
effective search space used: 6972506325
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)